salmon 0.13.1 Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
- Website: https://github.com/COMBINE-lab/salmon
- License: GPL 3+
- Package source: bioinformatics.scm
- Patches: snippet
- Builds: x86_64-linux, i686-linux