Guix

r-gprofiler2 0.1.9 Interface to the g:Profiler toolset

This package provides a toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via g:Profiler. The main tools are:

  1. g:GOSt, functional enrichment analysis and visualization of gene lists;

  2. g:Convert, gene/protein/transcript identifier conversion across various namespaces;

  3. g:Orth, orthology search across species;

  4. g:SNPense, mapping SNP rs identifiers to chromosome positions, genes and variant effects.

This package is an R interface corresponding to the 2019 update of g:Profiler and provides access to versions e94_eg41_p11 and higher.