r-edger 3.30.3 EdgeR does empirical analysis of digital gene expression data
This package can do differential expression analysis of RNA-seq expression profiles with biological replication. It implements a range of statistical methodology based on the negative binomial distributions, including empirical Bayes estimation, exact tests, generalized linear models and quasi-likelihood tests. It be applied to differential signal analysis of other types of genomic data that produce counts, including ChIP-seq, SAGE and CAGE.
- Website: http://bioinf.wehi.edu.au/edgeR
- License: GPL 2+
- Package source: bioinformatics.scm
- Patches: None
- Builds: x86_64-linux, i686-linux