express 1.5.3 Streaming quantification for high-throughput genomic sequencing
eXpress is a streaming tool for quantifying the abundances of a set of target sequences from sampled subsequences. Example applications include transcript-level RNA-Seq quantification, allele-specific/haplotype expression analysis (from RNA-Seq), transcription factor binding quantification in ChIP-Seq, and analysis of metagenomic data.
- Website: http://bio.math.berkeley.edu/eXpress
- License: Artistic License 2.0
- Package source: bioinformatics.scm
- Patches: None
- Builds: x86_64-linux, i686-linux